AddIons.o : AddIons.cpp ../AssociatedData.h ../Atom.h ../AtomMask.h ../AtomType.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajFile.h ../CpptrajStdio.h ../DataSet.h ../DataSetList.h ../DataSet_Coords.h ../DataSet_Coords_REF.h ../Dimension.h ../DistRoutines.h ../FileIO.h ../FileName.h ../Frame.h ../ImageOption.h ../MaskToken.h ../Matrix_3x3.h ../MetaData.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Parm/../AtomType.h ../Parm/../CmapParmHolder.h ../Parm/../Constants.h ../Parm/../FileName.h ../Parm/../NameType.h ../Parm/../ParameterTypes.h ../Parm/../Parm/ParmEnum.h ../Parm/../TypeNameHolder.h ../Parm/DihedralParmHolder.h ../Parm/ImproperParmHolder.h ../Parm/ParameterSet.h ../Parm/ParmEnum.h ../Parm/ParmHolder.h ../Random.h ../Range.h ../ReferenceFrame.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../TextFormat.h ../Timer.h ../Topology.h ../Unit.h ../Vec3.h AddIons.h
Builder.o : Builder.cpp ../Atom.h ../AtomMask.h ../AtomType.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../DistRoutines.h ../FileName.h ../Frame.h ../GuessAtomHybridization.h ../ImageOption.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Parm/../AtomType.h ../Parm/../CmapParmHolder.h ../Parm/../Constants.h ../Parm/../FileName.h ../Parm/../NameType.h ../Parm/../ParameterTypes.h ../Parm/../Parm/ParmEnum.h ../Parm/../TypeNameHolder.h ../Parm/DihedralParmHolder.h ../Parm/ImproperParmHolder.h ../Parm/ParameterSet.h ../Parm/ParmEnum.h ../Parm/ParmHolder.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Timer.h ../Topology.h ../TorsionRoutines.h ../TypeNameHolder.h ../Unit.h ../Vec3.h Builder.h Chirality.h GenerateConnectivityArrays.h InternalCoords.h StructureEnum.h Zmatrix.h
Chirality.o : Chirality.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../TorsionRoutines.h ../Unit.h ../Vec3.h Chirality.h StructureEnum.h
Creator.o : Creator.cpp ../ArgList.h ../AssociatedData.h ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajFile.h ../CpptrajStdio.h ../DataSet.h ../DataSetList.h ../DataSet_Coords.h ../DataSet_Coords_REF.h ../DataSet_NameMap.h ../DataSet_Parameters.h ../DataSet_PdbResMap.h ../Dimension.h ../FileIO.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../MetaData.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Parm/../AtomType.h ../Parm/../CmapParmHolder.h ../Parm/../Constants.h ../Parm/../FileName.h ../Parm/../NameType.h ../Parm/../ParameterTypes.h ../Parm/../Parm/ParmEnum.h ../Parm/../TypeNameHolder.h ../Parm/DihedralParmHolder.h ../Parm/ImproperParmHolder.h ../Parm/ParameterSet.h ../Parm/ParmEnum.h ../Parm/ParmHolder.h ../PdbResMapType.h ../Range.h ../ReferenceFrame.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../Structure/StructureEnum.h ../SymbolExporting.h ../TextFormat.h ../Timer.h ../Topology.h ../Unit.h ../Vec3.h Creator.h GenerateConnectivityArrays.h StructureEnum.h
Disulfide.o : Disulfide.cpp ../ArgList.h ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../DistRoutines.h ../FileName.h ../Frame.h ../ImageOption.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h Disulfide.h ResStatArray.h StructureRoutines.h
FunctionalGroup.o : FunctionalGroup.cpp ../Atom.h ../AtomMap.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MapAtom.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h FunctionalGroup.h
FxnGroupBuilder.o : FxnGroupBuilder.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h FunctionalGroup.h FxnGroupBuilder.h StructureRoutines.h Sugar.h SugarToken.h
GenerateConnectivityArrays.o : GenerateConnectivityArrays.cpp ../Atom.h ../Constants.h ../CpptrajStdio.h ../NameType.h ../ParameterTypes.h ../Residue.h ../SymbolExporting.h GenerateConnectivityArrays.h
HisProt.o : HisProt.cpp ../ArgList.h ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h HisProt.h StructureRoutines.h
InternalCoords.o : InternalCoords.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h InternalCoords.h
LeastSquaresPlane.o : LeastSquaresPlane.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../Molecule.h ../NameType.h ../Parallel.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Unit.h ../Vec3.h LeastSquaresPlane.h
MetalCenterFinder.o : MetalCenterFinder.cpp ../ArgList.h ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../DistRoutines.h ../FileName.h ../Frame.h ../ImageOption.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h MetalCenterFinder.h
Model.o : Model.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../TorsionRoutines.h ../Unit.h ../Vec3.h BuildAtom.h Model.h StructureEnum.h
OldBuilder.o : OldBuilder.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h BuildAtom.h Chirality.h InternalCoords.h OldBuilder.h StructureEnum.h Zmatrix.h
PdbCleaner.o : PdbCleaner.cpp ../ArgList.h ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h PdbCleaner.h
RingFinder.o : RingFinder.cpp ../Atom.h ../AtomMask.h ../Box.h ../CharMask.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h RingFinder.h
Solvate.o : Solvate.cpp ../Action.h ../ActionFrameCounter.h ../ActionState.h ../Action_AutoImage.h ../ArgList.h ../AssociatedData.h ../Atom.h ../AtomMask.h ../BaseIOtype.h ../Box.h ../CharMask.h ../Constants.h ../CoordinateInfo.h ../CpptrajFile.h ../CpptrajStdio.h ../DataFile.h ../DataFileList.h ../DataSet.h ../DataSetList.h ../DataSet_Coords.h ../DataSet_Coords_REF.h ../Dimension.h ../DispatchObject.h ../FileIO.h ../FileName.h ../FileTypes.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../MetaData.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../OutputTrajCommon.h ../Parallel.h ../ParameterTypes.h ../Parm/../AtomType.h ../Parm/../CmapParmHolder.h ../Parm/../Constants.h ../Parm/../FileName.h ../Parm/../NameType.h ../Parm/../ParameterTypes.h ../Parm/../Parm/ParmEnum.h ../Parm/../TypeNameHolder.h ../Parm/DihedralParmHolder.h ../Parm/ImproperParmHolder.h ../Parm/ParameterSet.h ../Parm/ParmEnum.h ../Parm/ParmHolder.h ../Range.h ../ReferenceFrame.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../StringRoutines.h ../SymbolExporting.h ../TextFormat.h ../Timer.h ../Topology.h ../TrajectoryFile.h ../Trajout_Single.h ../Unit.h ../Vec3.h Solvate.h
StructureEnum.o : StructureEnum.cpp StructureEnum.h
StructureRoutines.o : StructureRoutines.cpp ../Atom.h ../CpptrajStdio.h ../NameType.h ../Residue.h ../SymbolExporting.h StructureRoutines.h
Sugar.o : Sugar.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h Sugar.h SugarToken.h
SugarBuilder.o : SugarBuilder.cpp ../ArgList.h ../Atom.h ../AtomMap.h ../AtomMask.h ../Box.h ../CharMask.h ../Constants.h ../CoordinateInfo.h ../CpptrajFile.h ../CpptrajStdio.h ../DistRoutines.h ../FileIO.h ../FileName.h ../Frame.h ../ImageOption.h ../MapAtom.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../TorsionRoutines.h ../Unit.h ../Vec3.h Chirality.h FunctionalGroup.h FxnGroupBuilder.h LinkAtom.h ResStatArray.h StructureEnum.h StructureRoutines.h Sugar.h SugarBuilder.h SugarLinkAtoms.h SugarToken.h
SugarLinkAtoms.o : SugarLinkAtoms.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../FileName.h ../Frame.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../StringRoutines.h ../SymbolExporting.h ../Topology.h ../Unit.h ../Vec3.h LinkAtom.h SugarLinkAtoms.h
SugarToken.o : SugarToken.cpp ../ArgList.h ../CpptrajStdio.h SugarToken.h
Zmatrix.o : Zmatrix.cpp ../Atom.h ../AtomMask.h ../Box.h ../Constants.h ../CoordinateInfo.h ../CpptrajStdio.h ../DistRoutines.h ../FileName.h ../Frame.h ../ImageOption.h ../MaskToken.h ../Matrix_3x3.h ../ModXNA_Info.h ../Molecule.h ../NameType.h ../Parallel.h ../ParameterTypes.h ../Range.h ../ReplicaDimArray.h ../Residue.h ../Segment.h ../SymbolExporting.h ../Topology.h ../TorsionRoutines.h ../Unit.h ../Vec3.h BuildAtom.h GenerateConnectivityArrays.h InternalCoords.h Model.h StructureEnum.h Zmatrix.h
